Insertion junction: CLIP2.002023_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002023
Chromosome:chromosome 12
Location:3674250
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513700 HEL52 DEAD box ATP-dependent RNA helicase; (1 of 1) K14808 - ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13] (DDX54, DBP10) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCAAGTTGCCCGCCACCACCACCATTTCGCTTTCTAATTTGTAGTCA
Internal bar code:GATATGTGCTGGAGGGAGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1401
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AAACGCATTGGCTCACAACC
Suggested primer 2:TGACCGCGACTACCGTAATG