Insertion junction: CLIP2.002049_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002049
Chromosome:chromosome 7
Location:2470854
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329300 MSC1 Mechanosensitive ion channel; (1 of 1) PTHR30221 - SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGCGGGCTTTCGTTTCGTTTTGTAAACACACACACACACACACACAC
Internal bar code:GCGGTCTAGGGTTGGATATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2933
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCGGTATCGCCAATCACG
Suggested primer 2:CACCACCGAGAAGAACAGCT