Gene: Cre07.g329300

Overview

Common name:MSC1
Defline:Mechanosensitive ion channel; (1 of 1) PTHR30221 - SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL
Description:mechanosensitive ion channel; sequence similarity with bacterial (E. coli) mechanosensitive ion channel MscS
Synonyms:g7660.t1,Cre07.g329300.t1.1,MSC1
Chromosome:chromosome 7

Protein Localization

A plasmid for expressing Cre07.g329300 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre07.g329300-Venus-3xFLAG

Imaged strain: CSI_LW08A5

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.

Classification(s):

chloroplast/homogeneous/pyrenoid depleted

If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.

VenusChlorophyllBright fieldMerged

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.002049_3 CLIP2.002049 intron 80 6.1
CLIP2.002049_4 CLIP2.002049 intron 80 6.1
CLIP2.003649_1 CLIP2.003649 CDS 80 6.1
CLIP2.003649_2 CLIP2.003649 CDS 80 6.1
CLIP2.004424_1 CLIP2.004424 CDS 80 6.1
CLIP2.004424_2 CLIP2.004424 CDS 80 6.1
CLIP2.004730_1 CLIP2.004730 CDS 80 6.1
CLIP2.004730_2 CLIP2.004730 CDS 80 6.1
CLIP2.007543_1 CLIP2.007543 intron 80 6.1
CLIP2.007543_2 CLIP2.007543 intron 80 6.1
CLIP2.058375_1 CLIP2.058375 3'UTR 80 6.1
CLIP2.058375_2 CLIP2.058375 3'UTR 80 6.1
LMJ.RY0402.046783_1 LMJ.RY0402.046783 intron 95 5.5
LMJ.RY0402.046783_2 LMJ.RY0402.046783 3'UTR 95 5.5
LMJ.RY0402.077214_1 LMJ.RY0402.077214 intron 95 5.5
LMJ.RY0402.077214_2 LMJ.RY0402.077214 intron 95 5.5
LMJ.RY0402.089733_1 LMJ.RY0402.089733 CDS/intron 58 5.5
LMJ.RY0402.121074_1 LMJ.RY0402.121074 CDS 73 5.5
LMJ.RY0402.180194_1 LMJ.RY0402.180194 intron 73 5.5
LMJ.RY0402.182077_1 LMJ.RY0402.182077 5'UTR 58 5.5
LMJ.RY0402.206206_1 LMJ.RY0402.206206 intron 95 5.5
LMJ.RY0402.206206_2 LMJ.RY0402.206206 intron 95 5.5
LMJ.RY0402.208227_1 LMJ.RY0402.208227 CDS 73 5.5
LMJ.RY0402.216979_1 LMJ.RY0402.216979 intron 95 5.5
LMJ.RY0402.216979_2 LMJ.RY0402.216979 intron 95 5.5

Gene Annotations

PFAM:PF00924
PANTHER: PTHR30221 PTHR30221:SF1
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::GO:0016020, GO:0055085
Best arabidopsis TAIR name:AT1G58200.1
Best arabidopsis TAIR symbol:MSL3
Best arabidopsis TAIR defline:MSCS-like 3
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.