Insertion junction: CLIP2.003649_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003649
Chromosome:chromosome 7
Location:2471775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329300 MSC1 Mechanosensitive ion channel; (1 of 1) PTHR30221 - SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATGTACAGCGAGTTGCGGGCAACGTTCACAAACAGCACCACCGAGAA
Internal bar code:CCCGTTAAAAGGCATGATTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2168
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGTATCTCGTATGCGTGGGC
Suggested primer 2:CACCAGGCTGAGCTTCATCA