Insertion junction: CLIP2.004424_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004424
Chromosome:chromosome 7
Location:2470375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329300 MSC1 Mechanosensitive ion channel; (1 of 1) PTHR30221 - SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACCTCCTCACTTCCCCCTTTATCTCCATGCTGGGTGGCGAGAGCAGC
Internal bar code:ACCAGGACATGTGTACTCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1758
LEAP-Seq percent confirming:85.2941
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCACGCATACGAGATACA
Suggested primer 2:TCTCGGTATCGCCAATCACG