Insertion junction: CLIP2.002049_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002049
Chromosome:chromosome 7
Location:2470869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329300 MSC1 Mechanosensitive ion channel; (1 of 1) PTHR30221 - SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTACCGATACCCACCATTTTACCGAGCGTCGCGTGACTGTCGTGACCC
Internal bar code:TAGGATGTATAGCAAATCCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1992
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACCGAGAAGAACAGCT
Suggested primer 2:TCTCGGTATCGCCAATCACG