Insertion junction: CLIP2.004730_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004730
Chromosome:chromosome 7
Location:2473864
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329300 MSC1 Mechanosensitive ion channel; (1 of 1) PTHR30221 - SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTTGGGCACGGTGACGGTGGCGCCGTCCTCAGTGGCTATGAGTGTGC
Internal bar code:GGTTCAGATACCTGCTAAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:884
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGGGCAACTTTGTGAG
Suggested primer 2:GCGTCCAACACTCTCACGTA