Insertion junction: CLIP2.007543_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007543
Chromosome:chromosome 7
Location:2473710
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329300 MSC1 Mechanosensitive ion channel; (1 of 1) PTHR30221 - SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGTGGAGCCCACTGCGCCCAACCCAACACGGTACCCCGTACGCCGTA
Internal bar code:TGGAAGTAACTAGCTCATAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:741
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGGGCAACTTTGTGAG
Suggested primer 2:GCGTCCAACACTCTCACGTA