Insertion junction: CLIP2.058375_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058375
Chromosome:chromosome 7
Location:2476482
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329300 MSC1 Mechanosensitive ion channel; (1 of 1) PTHR30221 - SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL 3'UTR
Cre07.g329350 GT90F7,GT90-7 (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90); GT90 family protein 7 gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGCCCTTCTGCCTGCCGCCCGCCTGCGCCGGCTGCCCTGCACGCCCT
Internal bar code:GTTTACTCTTCGCACCAAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1951
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GACATCGAGTCGCTCATCGT
Suggested primer 2:TGGAGCAGATGAAGGCGTTT