Insertion junction: CLIP2.002133_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002133
Chromosome:chromosome 10
Location:2443982
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435400 (1 of 1) PF03398 - Regulator of Vps4 activity in the MVB pathway (Ist1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACTCCTGAGGCCGGAGTGGAGGGCTGCAGCTCCACGAGAGTCCTGTGG
Internal bar code:CAAGGGGGTTTAATAGTGACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:395
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGATGCATTAGAGCGAGG
Suggested primer 2:AGGGTACGAGGAAGCGTTTG