Gene: Cre10.g435400

Overview

Common name:
Defline:	(1 of 1) PF03398 - Regulator of Vps4 activity in the MVB pathway (Ist1)
Description:
Synonyms:	Cre10.g435400.t1.1,g10738.t1
Chromosome:	chromosome 10

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.002133_1	CLIP2.002133	intron	80	6.1
CLIP2.002133_2	CLIP2.002133	intron	80	6.1
CLIP2.002242_1	CLIP2.002242	CDS	80	6.1
CLIP2.002242_2	CLIP2.002242	CDS	80	6.1
CLIP2.002590_1	CLIP2.002590	CDS	80	6.1
CLIP2.002590_2	CLIP2.002590	CDS	80	6.1
CLIP2.004176_1	CLIP2.004176	CDS	80	6.1
CLIP2.004176_2	CLIP2.004176	CDS	80	6.1
CLIP2.004302_1	CLIP2.004302	3'UTR	80	6.1
CLIP2.004302_2	CLIP2.004302	3'UTR	80	6.1
CLIP2.006520_1	CLIP2.006520	intron	80	6.1
CLIP2.006520_2	CLIP2.006520	intron	80	6.1
CLIP2.006535_1	CLIP2.006535	CDS	80	6.1
CLIP2.006954_1	CLIP2.006954	3'UTR	80	6.1
CLIP2.006954_2	CLIP2.006954	3'UTR	80	6.1
CLIP2.007491_1	CLIP2.007491	3'UTR	80	6.1
CLIP2.007491_2	CLIP2.007491	3'UTR	80	6.1
CLIP2.045081_3	CLIP2.045081	intron	40	6.1
CLIP2.046274_2	CLIP2.046274	intron	63	6.1
CLIP2.072320_1	CLIP2.072320	5'UTR	80	6.1
CLIP2.077116_1	CLIP2.077116	3'UTR	80	6.1
CLIP2.077116_2	CLIP2.077116	3'UTR	80	6.1
CLIP2.077261_1	CLIP2.077261	intron	40	6.1
CLIP2.077749_1	CLIP2.077749	3'UTR	80	6.1
LMJ.RY0402.048268_1	LMJ.RY0402.048268	5'UTR	95	5.5
LMJ.RY0402.048268_2	LMJ.RY0402.048268	5'UTR	95	5.5
LMJ.RY0402.058097_1	LMJ.RY0402.058097	intron	95	5.5
LMJ.RY0402.058097_2	LMJ.RY0402.058097	intron	95	5.5
LMJ.RY0402.067291_3	LMJ.RY0402.067291	intron	58	5.5
LMJ.RY0402.072505_2	LMJ.RY0402.072505	intron	58	5.5
LMJ.RY0402.077702_2	LMJ.RY0402.077702	CDS	58	5.5
LMJ.RY0402.084689_1	LMJ.RY0402.084689	3'UTR	95	5.5
LMJ.RY0402.084689_2	LMJ.RY0402.084689	3'UTR	95	5.5
LMJ.RY0402.094018_1	LMJ.RY0402.094018	5'UTR	58	5.5
LMJ.RY0402.115539_1	LMJ.RY0402.115539	CDS	73	5.5
LMJ.RY0402.123000_2	LMJ.RY0402.123000	intron	73	5.5
LMJ.RY0402.147886_1	LMJ.RY0402.147886	5'UTR	95	5.5
LMJ.RY0402.147886_2	LMJ.RY0402.147886	CDS	95	5.5
LMJ.RY0402.163110_2	LMJ.RY0402.163110	5'UTR	73	5.5
LMJ.RY0402.173956_1	LMJ.RY0402.173956	5'UTR	73	5.5
LMJ.RY0402.183796_3	LMJ.RY0402.183796	intron	73	5.5
LMJ.RY0402.191332_1	LMJ.RY0402.191332	intron	95	5.5
LMJ.RY0402.191332_2	LMJ.RY0402.191332	intron	95	5.5
LMJ.RY0402.207358_1	LMJ.RY0402.207358	intron	73	5.5
LMJ.RY0402.217853_1	LMJ.RY0402.217853	CDS	73	5.5
LMJ.RY0402.226167_1	LMJ.RY0402.226167	intron	95	5.5
LMJ.RY0402.226167_2	LMJ.RY0402.226167	intron	95	5.5
LMJ.RY0402.234182_1	LMJ.RY0402.234182	3'UTR	95	5.5
LMJ.RY0402.234182_2	LMJ.RY0402.234182	3'UTR	95	5.5
LMJ.RY0402.238998_1	LMJ.RY0402.238998	intron	95	5.5
LMJ.RY0402.238998_2	LMJ.RY0402.238998	intron	95	5.5
LMJ.RY0402.241563_1	LMJ.RY0402.241563	intron	95	5.5
LMJ.RY0402.241563_2	LMJ.RY0402.241563	intron	95	5.5
LMJ.RY0402.243272_1	LMJ.RY0402.243272	intron	95	5.5
LMJ.RY0402.243272_2	LMJ.RY0402.243272	intron	95	5.5
LMJ.RY0402.244952_1	LMJ.RY0402.244952	intron	95	5.5
LMJ.RY0402.244952_2	LMJ.RY0402.244952	intron	95	5.5
LMJ.RY0402.246514_1	LMJ.RY0402.246514	5'UTR	95	5.5
LMJ.RY0402.246514_2	LMJ.RY0402.246514	5'UTR	95	5.5
LMJ.RY0402.255347_4	LMJ.RY0402.255347	CDS	73	5.5

Gene Annotations

PFAM:	PF03398
PANTHER:	PTHR12161 PTHR12161:SF5
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:	AT1G34220.2
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:	Regulator of Vps4 activity in the MVB pathway protein
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.