Insertion junction: CLIP2.006535_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006535
Chromosome:chromosome 10
Location:2442892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435400 (1 of 1) PF03398 - Regulator of Vps4 activity in the MVB pathway (Ist1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACTGCAGGCAGGGCAGCGCAGGGTTATGGGCACAAGCACGTGATGCA
Internal bar code:TACGTTACGTATTGGTAAGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:514
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTAGCGTAACGGCGTCAG
Suggested primer 2:CCTCGCTCTAATGCATCGGT