Insertion junction: LMJ.RY0402.058097_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.058097
Chromosome:chromosome 10
Location:2401900
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g435400 (1 of 1) PF03398 - Regulator of Vps4 activity in the MVB pathway (Ist1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCATTCATTGCTTCCTCCCCCTGACGTC
Internal bar code:CTTCTCGTCCCTGGACAGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:639
LEAP-Seq percent confirming:37.885
LEAP-Seq n confirming:2669
LEAP-Seq n nonconfirming:4376
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGATCCTCATGCTCACCT
Suggested primer 2:CACCTCACCTCACCTCACCT