Insertion junction: CLIP2.006954_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006954
Chromosome:chromosome 10
Location:2448370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435400 (1 of 1) PF03398 - Regulator of Vps4 activity in the MVB pathway (Ist1) 3'UTR
Cre10.g435450 CPL2 (1 of 9) PTHR10071 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR; transcription factor-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGAACTGCACAGGGAGGCAGTGGCGGGACGGCGTTTTGAGGGCACGAG
Internal bar code:CACTGCATAGGATCTTTGCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2718
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATTGAAAGACTTGCGGC
Suggested primer 2:TGGCTGTGTCCTTCGAGTTC