Insertion junction: LMJ.RY0402.244952_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.244952
Chromosome:chromosome 10
Location:2401568
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g435400 (1 of 1) PF03398 - Regulator of Vps4 activity in the MVB pathway (Ist1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGGTCGGGTCGGGCGTCGTCAGGAGAG
Internal bar code:TTAGTTTTCCAGCGCTTATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:331
LEAP-Seq percent confirming:67.4927
LEAP-Seq n confirming:9696
LEAP-Seq n nonconfirming:4670
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGCAGCATCATATACGCC
Suggested primer 2:AGCAGCACTGGAGATGGAGT