Insertion junction: CLIP2.006520_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006520
Chromosome:chromosome 10
Location:2444049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435400 (1 of 1) PF03398 - Regulator of Vps4 activity in the MVB pathway (Ist1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGAATCCCCTAGCCCGATGCCCTAGACCCCGCCCTTGGACAGGGCTC
Internal bar code:TTCATTGAATCTATTCGCATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:360
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGATGCATTAGAGCGAGG
Suggested primer 2:ATTGCCTCAAGTCTGGTCGG