Insertion junction: LMJ.RY0402.072505_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.072505
Chromosome:chromosome 10
Location:2401156
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre10.g435400 (1 of 1) PF03398 - Regulator of Vps4 activity in the MVB pathway (Ist1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGGGGTACGAGGAGGGTACGAGGAAG
Internal bar code:CCCGGGACGGAGGCGCTCAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:161
LEAP-Seq percent confirming:51.7125
LEAP-Seq n confirming:1223
LEAP-Seq n nonconfirming:1142
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGGAGACTGCTTCGTCC
Suggested primer 2:TACCAGCCCAAACTAAACCG