Insertion junction: CLIP2.077116_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077116
Chromosome:chromosome 10
Location:2448152
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435400 (1 of 1) PF03398 - Regulator of Vps4 activity in the MVB pathway (Ist1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTCGGTTCCTTAAATCAGCGCCTGAACCAAACGGCAGCGCGGCAGCAT
Internal bar code:GGTATATTAATGGATCCACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2337
LEAP-Seq percent confirming:65.9574
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCCTGATCCGCGATTGT
Suggested primer 2:TGGCTGTGTCCTTCGAGTTC