Insertion junction: CLIP2.002140_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.002140
Chromosome:chromosome 12
Location:4357679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g519300 TEF9 (1 of 2) PF13301 - Protein of unknown function (DUF4079) (DUF4079); conserved expressed protein, possible chloroplast localization CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGATCCAAACCTCCACTAAGTTGTCATACACTTGTTCACATACAGCTC
Internal bar code:GGTGTTCCGGTTGGAGCTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1293
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CATACCGGGTGGATGAGAGC
Suggested primer 2:TACCGCCAGCTTGGAAATGT