Gene: Cre12.g519300
Overview
| Common name: | TEF9 |
| Defline: | (1 of 2) PF13301 - Protein of unknown function (DUF4079) (DUF4079); conserved expressed protein, possible chloroplast localization |
| Description: | Conserved expressed protein, possible chloroplast localization; Present in thylakoid-enriched fraction based on mass spectrometric peptide identification [PMID: 17078018] |
| Synonyms: | g12800.t1,Cre12.g519300.t1.1 |
| Chromosome: | chromosome 12 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_LW11H1
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre07.g330250 | PSAH1,PSAH | Cre12.g519300 | TEF9 | Mackinder et al. 2017 |
| Cre12.g519300 | TEF9 | Cre12.g519300 | TEF9 | Mackinder et al. 2017 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001291_1 | CLIP2.001291 | 3'UTR | 80 | 6.1 |
| CLIP2.001559_1 | CLIP2.001559 | intron | 80 | 6.1 |
| CLIP2.001687_1 | CLIP2.001687 | CDS | 80 | 6.1 |
| CLIP2.002140_1 | CLIP2.002140 | CDS | 80 | 6.1 |
| CLIP2.003081_1 | CLIP2.003081 | CDS | 80 | 6.1 |
| CLIP2.005689_1 | CLIP2.005689 | 3'UTR | 80 | 6.1 |
| CLIP2.005979_1 | CLIP2.005979 | intron | 80 | 6.1 |
| CLIP2.005979_2 | CLIP2.005979 | intron | 80 | 6.1 |
| CLIP2.006015_1 | CLIP2.006015 | CDS | 80 | 6.1 |
| CLIP2.006970_1 | CLIP2.006970 | CDS | 80 | 6.1 |
| LMJ.RY0402.207024_1 | LMJ.RY0402.207024 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.207024_2 | LMJ.RY0402.207024 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF13301 |
| PANTHER: | PTHR34679 PTHR34679:SF2 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT3G61870 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | (1 of 2) PF13301 - Protein of unknown function (DUF4079) (DUF4079) |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.