Insertion junction: CLIP2.002141_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002141
Chromosome:chromosome 2
Location:3374569
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098250 PPO3 (1 of 1) PF10615//PF13883 - Protein of unknown function (DUF2470) (DUF2470) // Pyridoxamine 5'-phosphate oxidase (Pyrid_oxidase_2); Pyridoxamine 5'-phosphate oxidase-like protein 3'UTR
Cre02.g098300 (1 of 1) K11547 - kinetochore protein NDC80 (NDC80, HEC1, TID3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCTCCAAAACTTGGCAAGTCCGGCTCAGGCGGCTTGCCGTTTGCGTC
Internal bar code:GGGGGCTTAGCCAAGACTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2011
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACGAAGAAGGCCAAGGG
Suggested primer 2:GTCGGATGATCAGAGCTGGG