Gene: Cre02.g098300
Overview
| Common name: | |
| Defline: | (1 of 1) K11547 - kinetochore protein NDC80 (NDC80, HEC1, TID3) |
| Description: | |
| Synonyms: | Cre02.g098300.t1.1,g1999.t1 |
| Chromosome: | chromosome 2 |
Protein Localization
A plasmid for expressing Cre02.g098300 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre02.g098300-Venus-3xFLAG
Imaged strain: CSI_LW06G11
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001249_1 | CLIP2.001249 | CDS | 80 | 6.1 |
| CLIP2.001249_2 | CLIP2.001249 | CDS | 80 | 6.1 |
| CLIP2.001830_1 | CLIP2.001830 | CDS | 80 | 6.1 |
| CLIP2.001830_2 | CLIP2.001830 | CDS | 80 | 6.1 |
| CLIP2.002141_1 | CLIP2.002141 | 3'UTR | 80 | 6.1 |
| CLIP2.002141_2 | CLIP2.002141 | 3'UTR | 80 | 6.1 |
| CLIP2.002479_1 | CLIP2.002479 | CDS | 80 | 6.1 |
| CLIP2.002479_2 | CLIP2.002479 | CDS | 80 | 6.1 |
| CLIP2.002892_1 | CLIP2.002892 | CDS | 80 | 6.1 |
| CLIP2.002892_2 | CLIP2.002892 | CDS | 80 | 6.1 |
| CLIP2.004205_1 | CLIP2.004205 | CDS | 80 | 6.1 |
| CLIP2.004205_2 | CLIP2.004205 | CDS | 80 | 6.1 |
| CLIP2.004270_1 | CLIP2.004270 | intron | 80 | 6.1 |
| CLIP2.004270_2 | CLIP2.004270 | intron | 80 | 6.1 |
| LMJ.RY0402.081386_1 | LMJ.RY0402.081386 | CDS | 73 | 5.5 |
Gene Annotations
| PFAM: | PF03801 |
| PANTHER: | PTHR10643 PTHR10643:SF2 |
| KEGG_ec: | |
| KEGG_orthology: | K11547 |
| KOG: | KOG0995 |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT3G54630 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | (1 of 1) PTHR10643 - KINETOCHORE PROTEIN NDC80 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.