Insertion junction: CLIP2.004270_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004270
Chromosome:chromosome 2
Location:3377149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098300 (1 of 1) K11547 - kinetochore protein NDC80 (NDC80, HEC1, TID3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGTCCCTCACCTTGCAGGGCCTGAAGCAGACGCTGACGCGCAAACTG
Internal bar code:CCTTTATGACTACAATTTACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2447
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TATACACGCGCTACAGGCTG
Suggested primer 2:CAGCAACACAACACGCGTTA