Insertion junction: CLIP2.002141_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002141
Chromosome:chromosome 2
Location:3374574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098250 PPO3 (1 of 1) PF10615//PF13883 - Protein of unknown function (DUF2470) (DUF2470) // Pyridoxamine 5'-phosphate oxidase (Pyrid_oxidase_2); Pyridoxamine 5'-phosphate oxidase-like protein 3'UTR
Cre02.g098300 (1 of 1) K11547 - kinetochore protein NDC80 (NDC80, HEC1, TID3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGCAAGCACATGTGTTGCGATGCGAGGAGCCACCAAGTCCTCCGGAT
Internal bar code:GGGGGCTTAGCCAAGACTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1161
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGATGATCAGAGCTGGG
Suggested primer 2:ATGACGAAGAAGGCCAAGGG