Insertion junction: CLIP2.001249_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001249
Chromosome:chromosome 2
Location:3375816
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098300 (1 of 1) K11547 - kinetochore protein NDC80 (NDC80, HEC1, TID3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGCTCAGCTGCAGGCGGCCAAGGACGCACACGAGGAGAAGTGCCGGC
Internal bar code:CGTCATAGAGATGACTTTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2130
LEAP-Seq percent confirming:99.0991
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCTCTGATCATCCGACC
Suggested primer 2:GAGCCTGTAACACAACCGGA