Insertion junction: CLIP2.002143_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002143
Chromosome:chromosome 3
Location:6023749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189800 CYN38 Cyclophilin 38; (1 of 1) PTHR11071//PTHR11071:SF236 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP38, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGCCATACCGGCAAGCCGTGTACGCGGCGTGTAGCTAGCGCTTACAA
Internal bar code:TAGAAAAGCCATTGAGGTGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4294
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TATCACAGGGCTTTGGGCTG
Suggested primer 2:ACATACCTACCCAGGAGCGT