Insertion junction: CLIP2.002143_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002143
Chromosome:chromosome 3
Location:6023757
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189800 CYN38 Cyclophilin 38; (1 of 1) PTHR11071//PTHR11071:SF236 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP38, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACAGAGACTGACCACCACGCCAACCCCACGCAAGCCCCGGCGCACGAC
Internal bar code:ATAAAGCCCTGTAGTTATTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:827
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACATACCTACCCAGGAGCGT
Suggested primer 2:TATCACAGGGCTTTGGGCTG