Insertion junction: CLIP2.002145_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002145
Chromosome:chromosome 17
Location:811849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701700 FAB2 Plastid acyl-ACP desaturase; (1 of 2) K03921 - acyl- (DESA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGGGGAGATGAAAGGGCGCACAAGGGAGGCGAAGGGTGGGAGGTGTC
Internal bar code:GTTGCGTCGCATGCGCTTCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:565
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTCCAGCTTACACCTT
Suggested primer 2:CTGCAGAGCCAGGTAAGCTT