Insertion junction: CLIP2.002176_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002176
Chromosome:chromosome 1
Location:2360636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013300 DEG10 Deg protease; (1 of 1) PTHR22939:SF87 - DO-LIKE 15 PROTEIN-RELATED 3'UTR
Cre01.g013350 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTACATTGATGCCTGACATGAAAGGAGGTGGCACGTGCGTGCATGCGA
Internal bar code:GTATGCTAGGGTGAACTAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2054
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCAGGACTCAGGAAGGC
Suggested primer 2:TCTGTGCTCCGCTAGTTTGG