CLiP

Gene: Cre01.g013300 (Genome version: v5.5)

Overview

Common name:	DEG10
Defline:	DegP-type protease
Description:	Serine protease, trypsin family, DegP type (HtrA) (protease Do) most similar to plant-type DegPs (2,3,4,9,10,11,12,13) [PMID: 11299370, PMID: 12185496]; one PDZ domain, probably involved in substrate recognition and protease activation [PMID: 15137941]; p
Synonyms:	g326.t1
Chromosome:	chromosome_1

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Orientation	Insertion Junction Feature	Confidence (%)
LMJ.RY0402.165673_1	LMJ.RY0402.165673	antisense	intron	73
LMJ.RY0402.221183_1	LMJ.RY0402.221183	antisense	intron	73
LMJ.RY0402.229617_1	LMJ.RY0402.229617	sense	intron	73

Gene Annotations

PFAM:	PF00089
PANTHER:	PTHR22939 PTHR22939:SF1
KEGG_ec:
KEGG_orthology:
KOG:	KOG1320
Gene ontology terms::	GO:0004252, GO:0006508
Best arabidopsis TAIR name:	AT5G36950.1
Best arabidopsis TAIR symbol:	DegP10
Best arabidopsis TAIR defline:	DegP protease 10
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Methyl methanesulfonate, screen 1 of 4 ( 89% confidence (FDR = 0.11))

Methyl methanesulfonate, screen 3 of 4 ( 89% confidence (FDR = 0.11))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.

Gene: Cre01.g013300 (Genome version: v5.3)