Insertion junction: CLIP2.002257_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002257
Chromosome:chromosome 6
Location:5456989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285950 5'UTR
Cre06.g286000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGACAGGGTGCGCCCGGACGCGGGAGGGCCGGGCCAGGTCCGGAACTG
Internal bar code:TGTCCAAAGTCAAACGGTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:860
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGCTGTAATGGCGCATG
Suggested primer 2:CCCAAGCAAAGGTTCAGCAC