Insertion junction: CLIP2.002273_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002273
Chromosome:chromosome 3
Location:8361013
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g198950 CGL30 (1 of 3) PTHR31407//PTHR31407:SF18 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCAGGGGCACACACCGTTGTGCAAGCTTGCGAAATAGACACAGAGGGG
Internal bar code:GACCGTGAAGTGGTAATAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1114
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCAACAAGCACTGCATC
Suggested primer 2:TCCCTCCTCCTACCCATGTG