Insertion junction: CLIP2.002284_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002284
Chromosome:chromosome 3
Location:2154870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156900 LHCBM5 (1 of 6) K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1); Light-harvesting Chlorophyll a/b binding protein of LHCII 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGTTCACAGCCTCAGGAGCATGTGGAGGGCTTTTGTTCGGTGTGTCC
Internal bar code:CAAGTATTTGAATCGTTTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:747
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACACGCTGCTGTGCATA
Suggested primer 2:TAAGGGTCGAACGAGGGGAT