Gene: Cre03.g156900
Overview
| Common name: | LHCBM5 |
| Defline: | (1 of 6) K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1); Light-harvesting Chlorophyll a/b binding protein of LHCII |
| Description: | Chlorophyll a-b binding protein of LHCII |
| Synonyms: | g3203.t1,Cre03.g156900.t1.1 |
| Chromosome: | chromosome 3 |
Protein Localization
A plasmid for expressing Cre03.g156900 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre03.g156900-Venus-3xFLAG
Imaged strain: CSI_LW02E12
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/not pyrenoid depleted
cytosol/cytosol (weak signal)
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001747_1 | CLIP2.001747 | intron | 80 | 6.1 |
| CLIP2.001747_2 | CLIP2.001747 | intron | 80 | 6.1 |
| CLIP2.002284_1 | CLIP2.002284 | 3'UTR | 80 | 6.1 |
| CLIP2.002284_2 | CLIP2.002284 | 3'UTR | 80 | 6.1 |
| CLIP2.002885_1 | CLIP2.002885 | 3'UTR | 80 | 6.1 |
| CLIP2.002885_2 | CLIP2.002885 | 3'UTR | 80 | 6.1 |
| CLIP2.004248_1 | CLIP2.004248 | CDS | 80 | 6.1 |
| CLIP2.006682_1 | CLIP2.006682 | intron | 80 | 6.1 |
| CLIP2.006682_2 | CLIP2.006682 | intron | 80 | 6.1 |
| CLIP2.007613_1 | CLIP2.007613 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.221976_1 | LMJ.RY0402.221976 | intron | 95 | 5.5 |
| LMJ.RY0402.221976_2 | LMJ.RY0402.221976 | intron | 95 | 5.5 |
Gene Annotations
| PFAM: | PF00504 |
| PANTHER: | PTHR21649 PTHR21649:SF8 |
| KEGG_ec: | EC:1.10.3.9 |
| KEGG_orthology: | K08912 |
| KOG: | |
| Gene ontology terms:: | GO:0009765, GO:0016020 |
| Best arabidopsis TAIR name: | AT2G05070.1 |
| Best arabidopsis TAIR symbol: | LHCB2,LHCB2.2 |
| Best arabidopsis TAIR defline: | photosystem II light harvesting complex gene 2.2 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.