Insertion junction: CLIP2.002295_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002295
Chromosome:chromosome 16
Location:3009897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663900 HMBS,PBGD1 (1 of 2) 2.5.1.61 - Hydroxymethylbilane synthase / Uroporphyrinogen synthetase; Porphobilinogen deaminase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAAGTGAATTTACACCAGACACAACAATCACGCTCTCACACACGCGTCA
Internal bar code:AGGGAGGGCAAGTAAGTAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:6017
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGTGTGCGTTTGAAGGC
Suggested primer 2:GTTGTACCGTCGTGTGGTCT