Insertion junction: CLIP2.002379_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002379
Chromosome:chromosome 17
Location:3734063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726350 (1 of 1) IPR000104//IPR002794 - Antifreeze protein, type I // Protein of unknown function DUF92, TMEM19 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTTCCCCATCAACTTGGCAGCAACGAACATCGCCCTCAAACACAAATA
Internal bar code:TCGTCCGTTACGTGCGAACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:775
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCATGTTCGGCTGGAGA
Suggested primer 2:AGAGAATCCACTTGGCCACG