Gene: Cre17.g726350
Overview
| Common name: | |
| Defline: | (1 of 1) IPR000104//IPR002794 - Antifreeze protein, type I // Protein of unknown function DUF92, TMEM19 |
| Description: | |
| Synonyms: | g17563.t1 |
| Chromosome: | chromosome 17 |
Protein Localization
A plasmid for expressing Cre17.g726350 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre17.g726350-Venus-3xFLAG
Imaged strain: CSI_LW08B1
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002379_1 | CLIP2.002379 | 3'UTR | 80 | 6.1 |
| CLIP2.002379_2 | CLIP2.002379 | 3'UTR | 80 | 6.1 |
| CLIP2.004496_3 | CLIP2.004496 | 3'UTR | 80 | 6.1 |
| CLIP2.004496_4 | CLIP2.004496 | 3'UTR | 80 | 6.1 |
| CLIP2.004878_1 | CLIP2.004878 | 3'UTR | 63 | 6.1 |
| CLIP2.005847_1 | CLIP2.005847 | 5'UTR | 80 | 6.1 |
| CLIP2.005847_2 | CLIP2.005847 | 5'UTR | 80 | 6.1 |
| CLIP2.007398_1 | CLIP2.007398 | CDS | 80 | 6.1 |
| CLIP2.007440_4 | CLIP2.007440 | CDS | 40 | 6.1 |
| LMJ.RY0402.110885_1 | LMJ.RY0402.110885 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.110885_2 | LMJ.RY0402.110885 | 3'UTR | 95 | 5.5 |
| LMJ.SG0182.017776_1 | LMJ.SG0182.017776 | 3'UTR | 75 | 5.3 |
Gene Annotations
| PFAM: | PF01940 |
| PANTHER: | PTHR13353 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG4491 |
| Gene ontology terms:: | GO:0016021, GO:0042309, GO:0050825, GO:0050826 |
| Best arabidopsis TAIR name: | AT5G19930.1 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Protein of unknown function DUF92, transmembrane |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.