Insertion junction: CLIP2.005847_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005847
Chromosome:chromosome 17
Location:3737842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726350 (1 of 1) IPR000104//IPR002794 - Antifreeze protein, type I // Protein of unknown function DUF92, TMEM19 5'UTR
Cre17.g726400 (1 of 6) K04710 - ceramide synthetase (CERS) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGGGACGTTGACAATGAAAACGTCCTTTGATGGAGGTCAGCGTGCCGA
Internal bar code:ATATTACGCGTTGGCAGAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5084
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCACGGATATGACCCTTA
Suggested primer 2:TGCTCACCTGTGCGATTTCT