Insertion junction: CLIP2.007440_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007440
Chromosome:chromosome 17
Location:3736516
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g726350 (1 of 1) IPR000104//IPR002794 - Antifreeze protein, type I // Protein of unknown function DUF92, TMEM19 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGTTCGGCCTGGCTACGCAGTGGGCGGGCGCGGCAGCGGGCGCCGCCC
Internal bar code:GTACGATAGTTCCAACGCGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:117
LEAP-Seq percent confirming:5.40541
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:AAAATGATCTGCCCCTCCCG
Suggested primer 2:CTTCCTCCTCCTCCTCCTCC