Insertion junction: CLIP2.002395_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002395
Chromosome:chromosome 3
Location:1975372
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155600 (1 of 2) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H 5'UTR
Cre03.g155650 CLC1 Clathrin light chain; (1 of 1) PTHR10639 - CLATHRIN LIGHT CHAIN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAGGAGAAGCACCGACGCGTCATTGCGAAGGCGCAGGGTTTGCCCAA
Internal bar code:CAAACCAAAGCAGACGGTACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1519
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTCTCAACACGACGGGAC
Suggested primer 2:AGCACGGAGAAAGTCACAGG