Insertion junction: CLIP2.002422_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002422
Chromosome:chromosome 9
Location:2348896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394150 RAA1,OPR40 psaA mRNA trans-splicing factor; (1 of 3) PF06743 - FAST kinase-like protein, subdomain 1 (FAST_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGATGGCGGCCGCGGGTGCGGCTGCGGCAGTGCACTCCACCACACCG
Internal bar code:CTTTAACGACAGTCGTGCATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3310
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGCACATCAGGGAGA
Suggested primer 2:GCACAAACGAAGCACCATGT