Insertion junction: CLIP2.002443_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002443
Chromosome:chromosome 6
Location:4826521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280050 ROC86,XRN1 (1 of 1) K12618 - 5'-3' exoribonuclease 1 (XRN1, SEP1, KEM1); 5' to 3' exoribonuclease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACGTGAGGCCACTCAACCTTATGAGCTCATACAGAGGGCAGGCATTTG
Internal bar code:TAACGCAGCTAAACCACAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2254
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCCTGTGTGTAAGGAC
Suggested primer 2:TCCTTGCTTGACTCCGTGTC