Insertion junction: CLIP2.002493_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002493
Chromosome:chromosome 13
Location:4123617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591100 MSCL3,MSC5 (1 of 1) IPR000104//IPR002048//IPR006685//IPR010920 - Antifreeze protein, type I // EF-hand domain // Mechanosensitive ion channel MscS // LSM domain; Predicted protein with mechanosensitive ion channel domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCTTCCTTCTCCCCTCTCCATGATCCCCTCCGCCTCCCCTCCTCGCT
Internal bar code:CGTTACATGTACAAGACTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:372
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTAAATCCTGGGGCCCT
Suggested primer 2:AACACCCTCACAGCCAACAA