Gene: Cre13.g591100

Overview

Common name:MSCL3,MSC5
Defline:(1 of 1) IPR000104//IPR002048//IPR006685//IPR010920 - Antifreeze protein, type I // EF-hand domain // Mechanosensitive ion channel MscS // LSM domain; Predicted protein with mechanosensitive ion channel domain
Description:protein of unknown function with mechanosensitive ion channel (MSC) like domain
Synonyms:MSCL3,g14496.t1,MSC5
Chromosome:chromosome 13

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.002493_1 CLIP2.002493 intron 80 6.1
CLIP2.002493_2 CLIP2.002493 intron 80 6.1
CLIP2.002668_1 CLIP2.002668 intron 80 6.1
CLIP2.002668_2 CLIP2.002668 intron 80 6.1
CLIP2.004035_1 CLIP2.004035 CDS 80 6.1
CLIP2.004035_2 CLIP2.004035 CDS 80 6.1
CLIP2.006369_3 CLIP2.006369 intron 80 6.1
CLIP2.006369_4 CLIP2.006369 intron 80 6.1
CLIP2.007463_1 CLIP2.007463 CDS 80 6.1
CLIP2.007463_2 CLIP2.007463 CDS 80 6.1
LMJ.RY0402.046001_1 LMJ.RY0402.046001 intron 73 5.5
LMJ.RY0402.064510_1 LMJ.RY0402.064510 CDS 73 5.5
LMJ.RY0402.071819_1 LMJ.RY0402.071819 intron 58 5.5
LMJ.RY0402.080951_1 LMJ.RY0402.080951 intron 58 5.5
LMJ.RY0402.089219_1 LMJ.RY0402.089219 intron 58 5.5
LMJ.RY0402.094132_1 LMJ.RY0402.094132 CDS 73 5.5
LMJ.RY0402.121813_3 LMJ.RY0402.121813 CDS 73 5.5
LMJ.RY0402.131163_2 LMJ.RY0402.131163 CDS 73 5.5
LMJ.RY0402.133520_1 LMJ.RY0402.133520 intron 73 5.5
LMJ.RY0402.141432_1 LMJ.RY0402.141432 intron 95 5.5
LMJ.RY0402.141432_2 LMJ.RY0402.141432 intron 95 5.5
LMJ.RY0402.157569_1 LMJ.RY0402.157569 intron 73 5.5
LMJ.RY0402.183921_1 LMJ.RY0402.183921 intron 95 5.5
LMJ.RY0402.183921_2 LMJ.RY0402.183921 intron 95 5.5
LMJ.RY0402.194343_2 LMJ.RY0402.194343 CDS 73 5.5
LMJ.RY0402.204504_1 LMJ.RY0402.204504 intron 95 5.5
LMJ.RY0402.204504_2 LMJ.RY0402.204504 intron 95 5.5
LMJ.RY0402.207097_1 LMJ.RY0402.207097 intron 73 5.5
LMJ.RY0402.212201_1 LMJ.RY0402.212201 intron 95 5.5
LMJ.RY0402.212201_2 LMJ.RY0402.212201 intron 95 5.5
LMJ.RY0402.236460_1 LMJ.RY0402.236460 CDS 58 5.5
LMJ.RY0402.237467_1 LMJ.RY0402.237467 intron 73 5.5
LMJ.RY0402.256658_1 LMJ.RY0402.256658 intron 73 5.5

Gene Annotations

PFAM:PF00924
PANTHER: PTHR31323
KEGG_ec:
KEGG_orthology:
KOG:KOG4462
Gene ontology terms::GO:0005509, GO:0016020, GO:0042309, GO:0050825, GO:0050826, GO:0055085
Best arabidopsis TAIR name:AT1G53470.1
Best arabidopsis TAIR symbol:MSL4
Best arabidopsis TAIR defline:mechanosensitive channel of small conductance-like 4
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

LAT034B04, screen 1 of 1 ( 90% confidence (FDR = 0.096))
LAT042C03, screen 1 of 1 ( 86% confidence (FDR = 0.14))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.