Insertion junction: LMJ.RY0402.207097_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.207097
Chromosome:chromosome 13
Location:4035986
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g591100 MSCL3,MSC5 (1 of 1) IPR000104//IPR002048//IPR006685//IPR010920 - Antifreeze protein, type I // EF-hand domain // Mechanosensitive ion channel MscS // LSM domain; Predicted protein with mechanosensitive ion channel domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAATATAACTCCCCCCAAAACCTTCCTTC
Internal bar code:GTCTAGCGGCTGCCTTTTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:99.7906
LEAP-Seq n confirming:953
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCGTGTGTGTGTATTGGT
Suggested primer 2:GCACGTACTCCTTCTCCAGC