Insertion junction: LMJ.RY0402.236460_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.236460
Chromosome:chromosome 13
Location:4030310
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g591100 MSCL3,MSC5 (1 of 1) IPR000104//IPR002048//IPR006685//IPR010920 - Antifreeze protein, type I // EF-hand domain // Mechanosensitive ion channel MscS // LSM domain; Predicted protein with mechanosensitive ion channel domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACCCAGTAGGCCTGCCGGCCCCTGCTG
Internal bar code:CCGTCGTCACGTGCCCTGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:436
LEAP-Seq percent confirming:51.953
LEAP-Seq n confirming:3139
LEAP-Seq n nonconfirming:2903
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AAACAGAGCTGTGTGCGTTG
Suggested primer 2:GGCAAGTATGCGGAGAAGAG