Insertion junction: LMJ.RY0402.131163_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.131163
Chromosome:chromosome 13
Location:4038002
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g591100 MSCL3,MSC5 (1 of 1) IPR000104//IPR002048//IPR006685//IPR010920 - Antifreeze protein, type I // EF-hand domain // Mechanosensitive ion channel MscS // LSM domain; Predicted protein with mechanosensitive ion channel domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGTATACTGCTGGTGCGACAGGCCCGC
Internal bar code:GGGAACGAACGGGTGTAATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:540
LEAP-Seq percent confirming:97.6227
LEAP-Seq n confirming:4394
LEAP-Seq n nonconfirming:107
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTAATGGAGGTTGCGGATGT
Suggested primer 2:ACGTCGCACTTAGCGTCAC