Insertion junction: LMJ.RY0402.133520_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.133520
Chromosome:chromosome 13
Location:4035287
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g591100 MSCL3,MSC5 (1 of 1) IPR000104//IPR002048//IPR006685//IPR010920 - Antifreeze protein, type I // EF-hand domain // Mechanosensitive ion channel MscS // LSM domain; Predicted protein with mechanosensitive ion channel domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTATATCGCGTTGCCTCGCTCCCCTCACT
Internal bar code:GAGGTGGGTCGGTTCCGGCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:569
LEAP-Seq percent confirming:93.7152
LEAP-Seq n confirming:1178
LEAP-Seq n nonconfirming:79
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCATCTTCTTCCTGGTGC
Suggested primer 2:ACGAGTTGGTGGAGACAACC