Insertion junction: LMJ.RY0402.064510_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.064510
Chromosome:chromosome 13
Location:4041201
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g591100 MSCL3,MSC5 (1 of 1) IPR000104//IPR002048//IPR006685//IPR010920 - Antifreeze protein, type I // EF-hand domain // Mechanosensitive ion channel MscS // LSM domain; Predicted protein with mechanosensitive ion channel domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGCCGGGGTCTCTCTGCGGGGGGGGGG
Internal bar code:TAAGTACCGGCTGGCTCTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:714
LEAP-Seq percent confirming:99.3322
LEAP-Seq n confirming:4016
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAAGATCCTGTAACGGGG
Suggested primer 2:AGCAGCTGATGTGGGTCAG