Insertion junction: CLIP2.002493_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002493
Chromosome:chromosome 13
Location:4123624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591100 MSCL3,MSC5 (1 of 1) IPR000104//IPR002048//IPR006685//IPR010920 - Antifreeze protein, type I // EF-hand domain // Mechanosensitive ion channel MscS // LSM domain; Predicted protein with mechanosensitive ion channel domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAGGCAGGGATTAGCGCAGGGGTTGTGCCAGCGACAGAAAGCCGCCGT
Internal bar code:ACAATAGGATGGTCTACTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:258
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AACACCCTCACAGCCAACAA
Suggested primer 2:GCTTTAAATCCTGGGGCCCT